Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907800.1_cds_XP_016457912.1_51589
CDS Infomation

[gene=LOC107781689] [db_xref=GeneID:107781689] [protein=uncharacterized protein LOC107781689 isoform X2] [protein_id=XP_016457912.1] [location=complement(join(11742..12325,12677..13002,13603..13709,13847..14020,14106..14360,15402..15551))] [gbkey=CDS]
Sequence

ATGGTTCAATTGATGAATACTGTTGAAGTGTTGCCGGAGTTGCAGTGGCGGAAGGGGAAA
ACGGCGGTGGTGAAGCTGGAAATAGAGGATGATTTGGATGAAGCACACGGCCCACTTAAC
AAGCGATCAAAGCTTTCCTCTTCTCTCCAACAATTGAGTGTAGGAGCTGACGGTTTCCCA
GTACCACCATCGCAGTACAACCCGCTAGATGAGCCCAGTCCATTAGGTTTGAGGCTGCGG
AAGAGCCCATCGCTGTTGGATTTGATCCAGATGAAGCTTTCCCAGGGGAACAGCCCCAAG
GTGGGAAACCATGGGAAGAAGGAGCAGAAAGGAAACTCTGTAACTACTGAAAAACTAAAG
GCTTCAAATTTTCCTGCCTCAGTTCTGAGAATTGGGAGCTGGGAGTATAAGTCAAGATAT
GAAGGGGATTTAGTAGCAAAATGTTACTTTGCAAAGCATAAACTCGTTTGGGAAGTCCTT
GACGGTGGTCTCAAGAATAAGATAGAAATCCAGTGGTCCGATATTATGGGTCTGAAGGCA
AGTTACCCAGATGATGGACCTGGAACTCTAGACGTAGTGCTAGCAAGACAACCTCTTTTC
TTCAGGGAAACAAATCCACAACCCAGGAAGCATACTCTGTGGCAAGCAACATCTGATTTT
ACTGGAGGACAGGCTAGCATACACAAGAAACATTACTTACAGTGTCCACCAGGCTTGATG
GGAAAGCATTTTGAAAAGCTCGTTCAGTGCGATCCTCATCTTAACTTCCTAAGTCAACAA
CCAGAGATTACACTAGATTCTCCATATTTCGAATCCAGAATTTCAGTATTTGAAGACCCA
AATGTATCTGACTCAGAATTTAATCTGAATAATGAGAAAAATACCCCCTTTCTCAACTTG
CAAGGTCCTGCCTCACCTTCAGGAGCCTATTGTTCTACCTCAAAGGCTGAGCAAGATGAT
GTTAGAAGACCATTGGAAGGTGTTCCTCCAGAGAGACGTTCGCCAATCTCAGTGATGGAT
ACAAGGGCAACTCAAGATGTTATGAGTAGAGATATGGAGAAATTGAAAGGTCTCAGTAAC
CTGGAGCAGGTCAAAGTGCCTGGTTTTCATCCTTCCGTGTCAATGAAAGATTTAGTGAGC
CACTTCGAACAACGTTTCTCCGAGCAGGGTACATCTGAAGTCATCAACCTGTCAAGTGAT
GAACGGCAAAGCTTGCAGATTCTGGAAGATATCTCGAGGTGCTTGTTTAGTGACGCTCAG
AATATGCCAGAATCAGATGAGAAATCCCTCATGTCACGGGTGAATTCTTTGTGCTGTCTT
ATTCAGAAGGATCATGCAACAGCTCATAAGAGTGAGAATTCAGGTTATGTTGCTGTTGAA
GGAAATAGAACTGATGAATTGAGTTTCTTTCCCGTAGCAGCAAGTGTAAATAAGGTTGAA
GATCCTTCTACAACAGAGGATAAATCAAATGATCCAACTCCGTCAATGTCGAGAAAAGAC
TCCGTAGGGGAGTTGTTGATGAATCTGCCAAGGATAGCATCGTTGCCTCAGTTTTTGTTC
AATATCTATGAAGATTCTGAGTACCAAGCTAGATAG

Peptide Sequence

PEP ID

XP_016457912.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107781689 isoform X2 [Nicotiana tabacum]
Sequence

MVQLMNTVEVLPELQWRKGKTAVVKLEIEDDLDEAHGPLNKRSKLSSSLQQLSVGADGFP
VPPSQYNPLDEPSPLGLRLRKSPSLLDLIQMKLSQGNSPKVGNHGKKEQKGNSVTTEKLK
ASNFPASVLRIGSWEYKSRYEGDLVAKCYFAKHKLVWEVLDGGLKNKIEIQWSDIMGLKA
SYPDDGPGTLDVVLARQPLFFRETNPQPRKHTLWQATSDFTGGQASIHKKHYLQCPPGLM
GKHFEKLVQCDPHLNFLSQQPEITLDSPYFESRISVFEDPNVSDSEFNLNNEKNTPFLNL
QGPASPSGAYCSTSKAEQDDVRRPLEGVPPERRSPISVMDTRATQDVMSRDMEKLKGLSN
LEQVKVPGFHPSVSMKDLVSHFEQRFSEQGTSEVINLSSDERQSLQILEDISRCLFSDAQ
NMPESDEKSLMSRVNSLCCLIQKDHATAHKSENSGYVAVEGNRTDELSFFPVAASVNKVE
DPSTTEDKSNDPTPSMSRKDSVGELLMNLPRIASLPQFLFNIYEDSEYQAR

Transcript Sequence

Gene sequence data has not been registered.